YALI0E15488g


similar to uniprot|P17709 Saccharomyces cerevisiae YCL040w GLK1 aldohexose specific glucokinase

Genomic environment map

Element type: CDS
Element length: 1440 nucleotides,
on sense strand of
Yali0E: 1841513..1842952.
Other names:
YALI-CDS2505.1
YALI-IPF2637
Coding sequence: 480 codons.
Database cross references:
EMBL: CR382131
GeneID: 2912006
GenomeReviews: CR382131_GR
HOGENOM: HBG522186

Computed results  

None available yet


Homologs and Orthologs

Homologs in protein family: GL3C0087
Orthologs: strict determination not possible; homologs must be refined manually

Protein YALI0E15488p  


similar to uniprot|P17709 Saccharomyces cerevisiae YCL040w GLK1 aldohexose specific glucokinase; SubName: Full=YALI0E15488p;

Protein domain map

Protein length: 479 amino acids
Protein family: GL3C0087
Database cross references:
InterPro: IPR001312
InterPro: IPR022672
InterPro: IPR022673
KEGG: yli:YALI0E15488g
PANTHER: PTHR19443
PRINTS: PR00475
Pfam: PF00349
Pfam: PF03727
RefSeq: XP_503983.1
UniProtKB/TrEMBL: Q6C5S9
UniProtKB: Q6C5S9_YARLI

Phylogeny  

PhylomeDB:YALI0E15488g

Computed results for YALI0E15488p  

None available yet

Gene Ontology terms  


Sequence data  


Nucleotide sequence    

>YALI0E15488g.nt
ATGACAATCACTCTGAGTCAGAAGGTTGGCGAGTTCGCCTCCGAGTTCGCCATCGATGGC
AGCTATGTTCAGCAAGGCGTCAAACACTTCGTCGATCAGACAGCACAGGCCCTCTCAGCA
AACATGGAAAGAGCAATGCCCATGATTCCCTCGTTTGTCACCCGAATTCCCACAGGGAAG
GAAAAGGGTGTCCAGTTGGCAGTTGACCTGGGAGGCACTAACTTCCGGGTCTCATCCGTG
CACCTGAATGGTGACCACACCCACAAAACGGTGGCATCAAAAGTTGCTGTCAGCGATGAC
CTCATGACTGGCACTCAAGCTGACTTCTTTGGATTTTTGGCCCAGCAAGTGAAAGATTTC
TTAACAGAACACCACTCAGAACATTTCAGCCAGACTGAGCCTTTGCGAATGGGAGTGACC
TTCTCGTTCCCCGTCAATCAGGTAGCTTTAGACAAGGGCTATCTTTTGAGATGGACCAAG
GGTTATGATATCAAGGATGCTGTTGGAAAAGACGTCGTGGAGCTATTTCAGATCCAGCTC
GATGCTCTTGACCTGAATGTGAAGATTGTGGCTCTGGTCAACGACACCGTGGGCACACTA
TTGGCGCGAGCTTACGCCTCTAAATCCGACGATGGTAAGCATAAGCAGACCTTGATCGGC
GCAATCTTTGGCACCGGAACCAATGGTGCTTACTCAGAAAGACTTAAGCGGGTCCCCAAG
TTTACCGCTGCGAATTACCCTGAAGTTTTCAAGCGCTACTCACCAGAGCACATCGCGAAC
CAAACTATGATTATCAATACCGAGTGGGGATCTTACGATAATGACATTGACGTCCTCCCA
AACACCAAATGGGATATTGACTTGGACGAAAACACTCACAACAAGTCTTTTCACATGTTT
GAAAAGCGGATTTCTGGAATGTTCCTGGGTGAGCTGTTGCGGCTCTGTCTTTTGGATTTG
AAGAGTGAGGGCCTACTTCTTCAATCCACAAAGTTGGAAGGAAACCCTGTTTGGAAGGGA
TTTGGAATGGACACTTCGGTCTTGTCATTCATTGAAGCAGCCACTGAGGCACAGATCGAG
ACAGGAAAGGGCGACTATGAGAAAATCATCAAGGCCATGGGTCTGGCCGCCAAGGACATC
ACTCCTGAACAAGTTGCTGCCCTGAAACCCCTGGTTACGGCTATTGGTAGACGATCTGCG
TATCTATCTGCCATTCCTTTAGCTGCCATTACTCTTCATACTCACGCTTTGGAGAAATTC
GACGTTGTTGACATTGGAGTTGACGGTTCTGTCTTCCAGTTTTACCCCAAATTTGCTGAT
ATGGTGAAAGAAGCGATGGGCTATGTCGAGGGTATTTCTGTTGACCGTATCGACATCGGC
CACGCAGAAGATGGCTCAGGGGTGGGAGCTGCCTTGGCTGCTTACCCGGACGACTCATAG


Coding sequence    

>YALI0E15488g.cds
ATGACAATCACTCTGAGTCAGAAGGTTGGCGAGTTCGCCTCCGAGTTCGCCATCGATGGC
AGCTATGTTCAGCAAGGCGTCAAACACTTCGTCGATCAGACAGCACAGGCCCTCTCAGCA
AACATGGAAAGAGCAATGCCCATGATTCCCTCGTTTGTCACCCGAATTCCCACAGGGAAG
GAAAAGGGTGTCCAGTTGGCAGTTGACCTGGGAGGCACTAACTTCCGGGTCTCATCCGTG
CACCTGAATGGTGACCACACCCACAAAACGGTGGCATCAAAAGTTGCTGTCAGCGATGAC
CTCATGACTGGCACTCAAGCTGACTTCTTTGGATTTTTGGCCCAGCAAGTGAAAGATTTC
TTAACAGAACACCACTCAGAACATTTCAGCCAGACTGAGCCTTTGCGAATGGGAGTGACC
TTCTCGTTCCCCGTCAATCAGGTAGCTTTAGACAAGGGCTATCTTTTGAGATGGACCAAG
GGTTATGATATCAAGGATGCTGTTGGAAAAGACGTCGTGGAGCTATTTCAGATCCAGCTC
GATGCTCTTGACCTGAATGTGAAGATTGTGGCTCTGGTCAACGACACCGTGGGCACACTA
TTGGCGCGAGCTTACGCCTCTAAATCCGACGATGGTAAGCATAAGCAGACCTTGATCGGC
GCAATCTTTGGCACCGGAACCAATGGTGCTTACTCAGAAAGACTTAAGCGGGTCCCCAAG
TTTACCGCTGCGAATTACCCTGAAGTTTTCAAGCGCTACTCACCAGAGCACATCGCGAAC
CAAACTATGATTATCAATACCGAGTGGGGATCTTACGATAATGACATTGACGTCCTCCCA
AACACCAAATGGGATATTGACTTGGACGAAAACACTCACAACAAGTCTTTTCACATGTTT
GAAAAGCGGATTTCTGGAATGTTCCTGGGTGAGCTGTTGCGGCTCTGTCTTTTGGATTTG
AAGAGTGAGGGCCTACTTCTTCAATCCACAAAGTTGGAAGGAAACCCTGTTTGGAAGGGA
TTTGGAATGGACACTTCGGTCTTGTCATTCATTGAAGCAGCCACTGAGGCACAGATCGAG
ACAGGAAAGGGCGACTATGAGAAAATCATCAAGGCCATGGGTCTGGCCGCCAAGGACATC
ACTCCTGAACAAGTTGCTGCCCTGAAACCCCTGGTTACGGCTATTGGTAGACGATCTGCG
TATCTATCTGCCATTCCTTTAGCTGCCATTACTCTTCATACTCACGCTTTGGAGAAATTC
GACGTTGTTGACATTGGAGTTGACGGTTCTGTCTTCCAGTTTTACCCCAAATTTGCTGAT
ATGGTGAAAGAAGCGATGGGCTATGTCGAGGGTATTTCTGTTGACCGTATCGACATCGGC
CACGCAGAAGATGGCTCAGGGGTGGGAGCTGCCTTGGCTGCTTACCCGGACGACTCATAG


Predicted translation product    

>YALI0E15488g.aa
MTITLSQKVGEFASEFAIDGSYVQQGVKHFVDQTAQALSANMERAMPMIPSFVTRIPTGK
EKGVQLAVDLGGTNFRVSSVHLNGDHTHKTVASKVAVSDDLMTGTQADFFGFLAQQVKDF
LTEHHSEHFSQTEPLRMGVTFSFPVNQVALDKGYLLRWTKGYDIKDAVGKDVVELFQIQL
DALDLNVKIVALVNDTVGTLLARAYASKSDDGKHKQTLIGAIFGTGTNGAYSERLKRVPK
FTAANYPEVFKRYSPEHIANQTMIINTEWGSYDNDIDVLPNTKWDIDLDENTHNKSFHMF
EKRISGMFLGELLRLCLLDLKSEGLLLQSTKLEGNPVWKGFGMDTSVLSFIEAATEAQIE
TGKGDYEKIIKAMGLAAKDITPEQVAALKPLVTAIGRRSAYLSAIPLAAITLHTHALEKF
DVVDIGVDGSVFQFYPKFADMVKEAMGYVEGISVDRIDIGHAEDGSGVGAALAAYPDDS*





Legend and notes  


Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences
ColorNucleotide sequence and Coding sequencePredicted translation product
REDstart and stop codonsInitial methionine and sequence end
BLUEcoding sequenceprotein sequence
greynon-coding sequence (upstream, downstream or intron)
greydonor and acceptor splicing sites