YALI0D15268g

similar to uniprot|P53852 Saccharomyces cerevisiae YNL247w cysteinyl-tRNA synthetase

Genomic environment map

Element type: CDS
Element length: 2232 nucleotides,
on sense strand of
Yali0D: 1857268..1859499.
Other names:
YALI-CDS0999.1
YALI-IPF5956
Coding sequence: 744 codons.

Database cross references:
EMBL: CR382130
GeneID: 2910753
GenomeReviews: CR382130_GR
HOGENOM: HBG327651

Computed results

None available yet

Homologs and Orthologs

Génolevures family GL3R1891
Robust family of 11 members, sczltkgdpy (1 1 1 1 1 1 1 1 2 1)
11-member family, phyletic pattern sczltkgd-py, profile (1 1 1 1 1 1 1 1 0 2 1)
Proteins: SACE0N02046p CAGL0J07744p ZYRO0F15928p SAKL0C03520p KLTH0F03168p KLLA0C03025p ERGO0F20812p DEHA2E14476p PISO0M18998p PISO0N19241p YALI0D15268p
Search in: Génolevures Google

Homologs in protein family: GL3R1891
Orthologs: strict determination not possible; homologs must be refined manually

Protein YALI0D15268p

similar to uniprot|P53852 Saccharomyces cerevisiae YNL247w cysteinyl-tRNA synthetase; SubName: Full=YALI0D15268p;

Protein domain map

Protein length: 743 amino acids
Protein family: GL3R1891

Database cross references:
Gene3D: G3DSA:3.40.50.620
HAMAP: MF_00041
InterPro: IPR002308
InterPro: IPR009080
InterPro: IPR014729
InterPro: IPR015803
InterPro: IPR015804
InterPro: IPR024909
KEGG: yli:YALI0D15268g
PANTHER: PTHR10890
PRINTS: PR00983
Pfam: PF01406
RefSeq: XP_502853.1
TIGRFAMs: TIGR00435
UniProtKB/TrEMBL: Q6C909
UniProtKB: Q6C909_YARLI

Phylogeny

PhylomeDB:YALI0D15268g

Computed results for YALI0D15268p

None available yet

Gene Ontology terms

Sequence data

>YALI0D15268g.nt
ATGGACTCCTCCGCCGTTAAACAACCCGAGTGGCACGCTCCGAAAGAGCCCCAGTCTCGT
GACACCCTGAAGCTGTACAACTCGTTGACTCGATCCAAGACTGCTTTTGTTCCCATTGCT
GGCAACAAGGTCACCTGGTACTGCTGCGGGCCCACCGTCTACGACTCCAGCCACATGGGC
CATGCCCGAAATTACGTTAGCACCGACATCAACCGACGAATTCTACAGGACTACTTTGGA
TACGATGTTCTGTTCGTGCAGAATGTGACTGACATTGACGATAAGATCATCATCCGAGGC
CGACAGCAACACCTGTTCCAAAAGTACGTTGAGGAGAACAAGGGTCTGTCTCAGGAGGTG
CTGTCAAAGGTTCTCAGCAGCTGGAACGATTTCGCCAAGGACAAGCTCGGTTACACTGAT
GAGGTTGCCGATTTCGAGAAGTACGTGGAGTCGGAAACAACTAAACTCAAGTCAATCGAA
GACGCCAAGTTCAAGATGAACCTAGCAAGCGCACAGGCTGCTGCTAAGGCTCTCACCGAC
AAGACCGTCACACCAGACATTTTCTACCCTGCTGTCAAGGATGTTCTTGTGCTCACACTG
GATCAGGAGCAGGGCTCCACCGTGTCGGACCACAAGATCTTCCGAGAACTGTCTGCGTTC
TGGGAGGGTGAATTCGACAAGGACATGGCAAAACTCAACGTTCTGGCCCCCTCTGTCACA
ACTCGTGTCTCTGAGTACGTTCCTGAGATTGTCGAGTACGTGGAGAAGATCATCGACAAC
GGCTACGCCTACGTCAGCGATTCCGGCGTGTACTTCGACACCGCTGCCTTCGACAAGTCC
CACGACTACGCCAAGCTCCAGCCCTGGAACAAGGGCCATGCTGACCTGATTGATGAGGGA
GAAGGTTCTCTTTCCAATAAGACTGGCAAGCGAAATTCCTCTGATTTCGCCCTGTGGAAG
GCCTCCAAGCCCGGTGAGCCCTTCTGGGACTCTCCTTGGGGTCAGGGACGACCTGGATGG
CACATTGAGTGCTCTGTCATGGCTTCTGCCATTCTCGGTCCTCAGATGGACATTCACTCT
GGAGGTATTGATCTGGCATTCCCTCACCACGACAATGAGCTTGCCCAGAGTGAAGCCCAT
TACGACTGCAAGCAGTGGGTCAACTACTTCCTTCACACTGGCCACCTACACATCGAGGGT
CAGAAGATGAGCAAGTCTCTGAAGAACTTCATCACCATTGACGAGGCCCTCCAGACCTAT
TCTCCGCGGCAACTCCGTCTGGCGTTCGCCCTTCAGCAGTGGAACAACCAACTCGACTTC
AAGTCTGCCCTGATTTCCGAGGTCAAGTCCGTGGAGTCCACCTTCTCAAAGTTTTTTGCC
AAGGTCCGTGCTCTCAAGGGCGAAGTTGAGGACAAGGTTTCAAAGGGTGTTCTTGTTTCC
AAGAAGACCGGCCCTGCTGAGCTTGCCCTGCTGAACGCTCTGTCCGACTGCAAGGAGGCC
GTTCACATTGCTCTCTGTGACAATCTGGCCACACCTGCTGCTATTCAGAACATGGTGCAG
CTTGTTGGCAAGGTCAACCTTTACCTTGGCGAGACTTCCACCGAGAATGTGCGAACTGAG
ATTCTGGTTGATGTTGCCACCTTCATTAGCAAGATGTTCGCCGTCTTTGGTTTCCGAACT
CGAACTGACAACCTGGGTTTCACCGAAGAGTCTTCCGAGGCTTCTTCCGAGGCTCTGATC
ATGCCCTACCTTACCACTCTGCGAAACTTCCGGGACGACATTCGAGGTAAGGCTATGGCT
CGAGCCGCTCATCTCGAATTCCTGCAGGCCACTGATCAGGTGAGATTCGACCTGCTTAAG
CAGGGCGTTTCCCTTGACGACCGTGGTGTCGGCGAGCCTGCCCTGATCAAGATTCTGTCC
GATTCTGAGAAGCTGGAGCTGATCAAGGCACAGGAGGAGAAGGAGAAGCGAGCTGCGGAG
AAGGCTGCCAAGCGAGAGGCCCAGGCCAAGCTGGAGGCGCAGAAGGTTGCCGAGAGAGAG
GCCAAGGCTAAGATTGCTCCCAAGGATCTGTGGAAGGATGACCCCGCTTATTCGCAGTGG
GATGAGGACGGAATCCCAACCCATAACGCTGAGGGTGAAGCTATTTCTAAGAGTCTCAAG
AAGAAACTTACCAAACAGCATGAGGCCCAGAAGAAGCTGTATCATGACTACGAGGGACAG
ATTTTGGAGTAA

>YALI0D15268g.cds
ATGGACTCCTCCGCCGTTAAACAACCCGAGTGGCACGCTCCGAAAGAGCCCCAGTCTCGT
GACACCCTGAAGCTGTACAACTCGTTGACTCGATCCAAGACTGCTTTTGTTCCCATTGCT
GGCAACAAGGTCACCTGGTACTGCTGCGGGCCCACCGTCTACGACTCCAGCCACATGGGC
CATGCCCGAAATTACGTTAGCACCGACATCAACCGACGAATTCTACAGGACTACTTTGGA
TACGATGTTCTGTTCGTGCAGAATGTGACTGACATTGACGATAAGATCATCATCCGAGGC
CGACAGCAACACCTGTTCCAAAAGTACGTTGAGGAGAACAAGGGTCTGTCTCAGGAGGTG
CTGTCAAAGGTTCTCAGCAGCTGGAACGATTTCGCCAAGGACAAGCTCGGTTACACTGAT
GAGGTTGCCGATTTCGAGAAGTACGTGGAGTCGGAAACAACTAAACTCAAGTCAATCGAA
GACGCCAAGTTCAAGATGAACCTAGCAAGCGCACAGGCTGCTGCTAAGGCTCTCACCGAC
AAGACCGTCACACCAGACATTTTCTACCCTGCTGTCAAGGATGTTCTTGTGCTCACACTG
GATCAGGAGCAGGGCTCCACCGTGTCGGACCACAAGATCTTCCGAGAACTGTCTGCGTTC
TGGGAGGGTGAATTCGACAAGGACATGGCAAAACTCAACGTTCTGGCCCCCTCTGTCACA
ACTCGTGTCTCTGAGTACGTTCCTGAGATTGTCGAGTACGTGGAGAAGATCATCGACAAC
GGCTACGCCTACGTCAGCGATTCCGGCGTGTACTTCGACACCGCTGCCTTCGACAAGTCC
CACGACTACGCCAAGCTCCAGCCCTGGAACAAGGGCCATGCTGACCTGATTGATGAGGGA
GAAGGTTCTCTTTCCAATAAGACTGGCAAGCGAAATTCCTCTGATTTCGCCCTGTGGAAG
GCCTCCAAGCCCGGTGAGCCCTTCTGGGACTCTCCTTGGGGTCAGGGACGACCTGGATGG
CACATTGAGTGCTCTGTCATGGCTTCTGCCATTCTCGGTCCTCAGATGGACATTCACTCT
GGAGGTATTGATCTGGCATTCCCTCACCACGACAATGAGCTTGCCCAGAGTGAAGCCCAT
TACGACTGCAAGCAGTGGGTCAACTACTTCCTTCACACTGGCCACCTACACATCGAGGGT
CAGAAGATGAGCAAGTCTCTGAAGAACTTCATCACCATTGACGAGGCCCTCCAGACCTAT
TCTCCGCGGCAACTCCGTCTGGCGTTCGCCCTTCAGCAGTGGAACAACCAACTCGACTTC
AAGTCTGCCCTGATTTCCGAGGTCAAGTCCGTGGAGTCCACCTTCTCAAAGTTTTTTGCC
AAGGTCCGTGCTCTCAAGGGCGAAGTTGAGGACAAGGTTTCAAAGGGTGTTCTTGTTTCC
AAGAAGACCGGCCCTGCTGAGCTTGCCCTGCTGAACGCTCTGTCCGACTGCAAGGAGGCC
GTTCACATTGCTCTCTGTGACAATCTGGCCACACCTGCTGCTATTCAGAACATGGTGCAG
CTTGTTGGCAAGGTCAACCTTTACCTTGGCGAGACTTCCACCGAGAATGTGCGAACTGAG
ATTCTGGTTGATGTTGCCACCTTCATTAGCAAGATGTTCGCCGTCTTTGGTTTCCGAACT
CGAACTGACAACCTGGGTTTCACCGAAGAGTCTTCCGAGGCTTCTTCCGAGGCTCTGATC
ATGCCCTACCTTACCACTCTGCGAAACTTCCGGGACGACATTCGAGGTAAGGCTATGGCT
CGAGCCGCTCATCTCGAATTCCTGCAGGCCACTGATCAGGTGAGATTCGACCTGCTTAAG
CAGGGCGTTTCCCTTGACGACCGTGGTGTCGGCGAGCCTGCCCTGATCAAGATTCTGTCC
GATTCTGAGAAGCTGGAGCTGATCAAGGCACAGGAGGAGAAGGAGAAGCGAGCTGCGGAG
AAGGCTGCCAAGCGAGAGGCCCAGGCCAAGCTGGAGGCGCAGAAGGTTGCCGAGAGAGAG
GCCAAGGCTAAGATTGCTCCCAAGGATCTGTGGAAGGATGACCCCGCTTATTCGCAGTGG
GATGAGGACGGAATCCCAACCCATAACGCTGAGGGTGAAGCTATTTCTAAGAGTCTCAAG
AAGAAACTTACCAAACAGCATGAGGCCCAGAAGAAGCTGTATCATGACTACGAGGGACAG
ATTTTGGAGTAA

>YALI0D15268g.aa
MDSSAVKQPEWHAPKEPQSRDTLKLYNSLTRSKTAFVPIAGNKVTWYCCGPTVYDSSHMG
HARNYVSTDINRRILQDYFGYDVLFVQNVTDIDDKIIIRGRQQHLFQKYVEENKGLSQEV
LSKVLSSWNDFAKDKLGYTDEVADFEKYVESETTKLKSIEDAKFKMNLASAQAAAKALTD
KTVTPDIFYPAVKDVLVLTLDQEQGSTVSDHKIFRELSAFWEGEFDKDMAKLNVLAPSVT
TRVSEYVPEIVEYVEKIIDNGYAYVSDSGVYFDTAAFDKSHDYAKLQPWNKGHADLIDEG
EGSLSNKTGKRNSSDFALWKASKPGEPFWDSPWGQGRPGWHIECSVMASAILGPQMDIHS
GGIDLAFPHHDNELAQSEAHYDCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEALQTY
SPRQLRLAFALQQWNNQLDFKSALISEVKSVESTFSKFFAKVRALKGEVEDKVSKGVLVS
KKTGPAELALLNALSDCKEAVHIALCDNLATPAAIQNMVQLVGKVNLYLGETSTENVRTE
ILVDVATFISKMFAVFGFRTRTDNLGFTEESSEASSEALIMPYLTTLRNFRDDIRGKAMA
RAAHLEFLQATDQVRFDLLKQGVSLDDRGVGEPALIKILSDSEKLELIKAQEEKEKRAAE
KAAKREAQAKLEAQKVAEREAKAKIAPKDLWKDDPAYSQWDEDGIPTHNAEGEAISKSLK
KKLTKQHEAQKKLYHDYEGQILE*

Legend and notes

Lengths
The length, in codons, of coding sequences includes the stop codon, hence it is one unit longer than the protein length.

Genomic environment map
Click on the symbol of an element or a family to go to its corresponding page. Colors in the lane "protein encoding genes" indicate strandedness: shades of blue for direct orientation, shades of red for reverse orientation. Colors in the lane "protein family" are arbitrarly chosen in such a way that different protein families have different colors in the map.

Protein domain map
Domains are extracted from SwissProt files. Click on the symbol of a domain to extract the domain sequence.

Genemark image and list
Genemark computation of protein-coding potential of DNA was made from 1000 nucleotides upstream the open reading frame to 300 nucleotides downstream. Thus the open reading frame protein-coding potential appears on frame #3.

Sequences

Color	Nucleotide sequence and Coding sequence	Predicted translation product
RED	start and stop codons	Initial methionine and sequence end
BLUE	coding sequence	protein sequence
grey	non-coding sequence (upstream, downstream or intron)
grey	donor and acceptor splicing sites

Genetic Elements

YALI0D15268g

YALI0D15268g

Genomic environment map

Computed results

Homologs and Orthologs

Protein YALI0D15268p

Protein domain map

Phylogeny

Computed results for YALI0D15268p

Gene Ontology terms

Sequence data

Nucleotide sequence

Coding sequence

Predicted translation product

Legend and notes